Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS005379
(Overall_Prop_M2)
 PGP000774 |
Li JL et al. Nat Genet (2026)
 Breast cancer breast carcinoma 175,173
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005379/ScoringFiles/PGS005379.txt.gz
PGS005380
(Erpos_M1)
 PGP000774 |
Li JL et al. Nat Genet (2026)
 Estrogen-receptor positive breast cancer estrogen-receptor positive breast cancer 592,247
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005380/ScoringFiles/PGS005380.txt.gz
PGS005381
(Erpos_M2)
 PGP000774 |
Li JL et al. Nat Genet (2026)
 Estrogen-receptor positive breast cancer estrogen-receptor positive breast cancer 109,933
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005381/ScoringFiles/PGS005381.txt.gz
PGS005382
(Erneg_M1)
 PGP000774 |
Li JL et al. Nat Genet (2026)
 Estrogen-receptor negative breast cancer estrogen-receptor negative breast cancer 2,005,141
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005382/ScoringFiles/PGS005382.txt.gz
PGS005383
(Erneg_M2)
 PGP000774 |
Li JL et al. Nat Genet (2026)
 Estrogen-receptor negative breast cancer estrogen-receptor negative breast cancer 37,783
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005383/ScoringFiles/PGS005383.txt.gz
PGS005384
(TNBC_M1)
 PGP000774 |
Li JL et al. Nat Genet (2026)
 Triple-negative breast cancer triple-negative breast carcinoma 554,959
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005384/ScoringFiles/PGS005384.txt.gz
PGS005385
(TNBC_M2)
 PGP000774 |
Li JL et al. Nat Genet (2026)
 Triple-negative breast cancer triple-negative breast carcinoma 37,226
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005385/ScoringFiles/PGS005385.txt.gz
PGS005386
(TNBC_162_M1)
 PGP000774 |
Li JL et al. Nat Genet (2026)
 Triple-negative breast cancer triple-negative breast carcinoma 162
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005386/ScoringFiles/PGS005386.txt.gz
PGS005387
(TNBC_162_M2)
 PGP000774 |
Li JL et al. Nat Genet (2026)
 Triple-negative breast cancer triple-negative breast carcinoma 162
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005387/ScoringFiles/PGS005387.txt.gz
PGS005392
(Q-PGS4_r0.2_p5e4)
 PGP000777 |
Aliyu U et al. Front Endocrinol (Lausanne) (2024)
 HOMA2-IR HOMA-IR 1,414
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005392/ScoringFiles/PGS005392.txt.gz
PGS005393
(PGS_SEXUAL_ASSAULT_PTSD)
 PGP000778 |
Bugiga AVG et al. Braz J Psychiatry (2024)
 Post-traumatic stress disorder post-traumatic stress disorder 53,705
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005393/ScoringFiles/PGS005393.txt.gz
PGS005398
(T1D_PRS_combined)
 PGP000781 |
Qu HQ et al. Diabetes Res Clin Pract (2026)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 645,391
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005398/ScoringFiles/PGS005398.txt.gz
PGS005399
(T1D_PRS_male)
 PGP000781 |
Qu HQ et al. Diabetes Res Clin Pract (2026)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 264,227
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005399/ScoringFiles/PGS005399.txt.gz
PGS005400
(T1D_PRS_female)
 PGP000781 |
Qu HQ et al. Diabetes Res Clin Pract (2026)
 Type 1 diabetes (T1D) type 1 diabetes mellitus 128,279
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005400/ScoringFiles/PGS005400.txt.gz
PGS005402
(PRS121)
 PGP000783 |
Chen H et al. Genome Med (2026)
 Colorectal cancer colorectal cancer 121
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005402/ScoringFiles/PGS005402.txt.gz
PGS012513
(eoe)
 PGP000785 |
Trimarchi MP et al. J Allergy Clin Immunol (2026)
 Eosinophilic esophagitis (EOE) eosinophilic esophagitis 1,039,900
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012513/ScoringFiles/PGS012513.txt.gz
PGS012539
(pSSNS)
 PGP000789 |
Barry A et al. Nat Commun (2023)
 Pediatric steroid-sensitive nephrotic syndrome nephrotic syndrome 1,081,086
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012539/ScoringFiles/PGS012539.txt.gz
PGS012540
(EN_model_Angina)
 PGP000790 |
Hu J et al. Genet Med (2026)
 Angina angina pectoris 969,769
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012540/ScoringFiles/PGS012540.txt.gz
PGS012541
(EN_model_Asthma)
 PGP000790 |
Hu J et al. Genet Med (2026)
 Asthma Asthma 969,763
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012541/ScoringFiles/PGS012541.txt.gz
PGS012542
(EN_model_CAD)
 PGP000790 |
Hu J et al. Genet Med (2026)
 Coronary artery disease coronary artery disorder 969,769
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012542/ScoringFiles/PGS012542.txt.gz
PGS012543
(EN_model_CKD)
 PGP000790 |
Hu J et al. Genet Med (2026)
 Chronic kidney disease chronic kidney disease 969,768
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012543/ScoringFiles/PGS012543.txt.gz
PGS012544
(EN_model_HF)
 PGP000790 |
Hu J et al. Genet Med (2026)
 Heart failure heart failure 969,507
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012544/ScoringFiles/PGS012544.txt.gz
PGS012545
(EN_model_IS)
 PGP000790 |
Hu J et al. Genet Med (2026)
 Ischemic stroke Ischemic stroke 969,253
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012545/ScoringFiles/PGS012545.txt.gz
PGS012546
(EN_model_PAD)
 PGP000790 |
Hu J et al. Genet Med (2026)
 Peripheral arterial disease peripheral arterial disease 969,771
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012546/ScoringFiles/PGS012546.txt.gz
PGS012547
(EN_model_T2D)
 PGP000790 |
Hu J et al. Genet Med (2026)
 Type 2 diabetes mellitus type 2 diabetes mellitus 969,771
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012547/ScoringFiles/PGS012547.txt.gz
PGS012548
(PRS94_AD)
 PGP000791 |
Li Y et al. J Gerontol A Biol Sci Med Sci (2024)
 Alzheimer's disease Alzheimer disease 94
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012548/ScoringFiles/PGS012548.txt.gz
PGS012549
(PRS10_NAFLD)
 PGP000792 |
Tang L et al. BMC Med (2023)
 Nonalcoholic fatty liver disease metabolic dysfunction-associated steatotic liver disease 10
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012549/ScoringFiles/PGS012549.txt.gz
PGS012550
(PRS13_IPF)
 PGP000793 |
Tang L et al. Environ Res (2023)
 Idiopathic pulmonary fibrosis idiopathic pulmonary fibrosis 13
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012550/ScoringFiles/PGS012550.txt.gz
PGS012551
(PRS_stroke)
 PGP000794 |
Ye Y et al. Front Bioinform (2024)
 Stroke stroke disorder 1,997,066
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012551/ScoringFiles/PGS012551.txt.gz
PGS012552
(PRS_HF)
 PGP000794 |
Ye Y et al. Front Bioinform (2024)
 Heart failure heart failure 1,935,626
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012552/ScoringFiles/PGS012552.txt.gz
PGS012553
(PRS24_BC)
 PGP000796 |
Koutros S et al. Eur Urol (2023)
 Bladder cancer urinary bladder carcinoma 24
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012553/ScoringFiles/PGS012553.txt.gz
PGS012554
(GRS_T2D)
 PGP000797 |
Yang R et al. BMC Med (2023)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 424
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS012554/ScoringFiles/PGS012554.txt.gz
Showing 5301 to 5332 of 5332 rows