Polygenic Scores (PGS)

Filter PGS by Participant Ancestry
Individuals included in:
G - Source of Variant Associations (GWAS)
D - Score Development/Training
E - PGS Evaluation
List of ancestries includes:
Display options:
Ancestry legend
Multi-ancestry (including European)
Multi-ancestry (excluding European)
African
East Asian
South Asian
Additional Asian Ancestries
European
Greater Middle Eastern
Hispanic or Latin American
Additional Diverse Ancestries
Not Reported
Polygenic Score ID & Name PGS Publication ID (PGP) Reported Trait Mapped Trait(s) (Ontology) Number of Variants Ancestry distribution
GWAS
Dev
Eval
 Scoring File (FTP Link)
PGS005232
(F1_Birth_Size)
 PGP000739 |
Arehart CH et al. Nat Commun (2025)
 Birth size birth weight 710,799
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005232/ScoringFiles/PGS005232.txt.gz
PGS005233
(F2_Abdominal_Size)
 PGP000739 |
Arehart CH et al. Nat Commun (2025)
 Abdominal size body fat distribution 710,487
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005233/ScoringFiles/PGS005233.txt.gz
PGS005234
(F3_Body_Size_and_Adipose_Distribution)
 PGP000739 |
Arehart CH et al. Nat Commun (2025)
 Body size and adipose distribution body weight,
body fat distribution		 709,193
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005234/ScoringFiles/PGS005234.txt.gz
PGS005235
(F4_Adiposity)
 PGP000739 |
Arehart CH et al. Nat Commun (2025)
 Adiposity obesity 709,828
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005235/ScoringFiles/PGS005235.txt.gz
PGS005236
(CAD_AnnoPred)
 PGP000740 |
Hu J et al. PLoS Comput Biol (2025)
 Coronary artery disease coronary artery disease 2,994,055
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005236/ScoringFiles/PGS005236.txt.gz
PGS005237
(SCT)
 PGP000741 |
Tanha HM et al. HGG Adv (2025)
 Prostate carcinoma prostate carcinoma 517,551
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005237/ScoringFiles/PGS005237.txt.gz
PGS005238
(LDpred2)
 PGP000741 |
Tanha HM et al. HGG Adv (2025)
 Prostate carcinoma prostate carcinoma 964,607
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005238/ScoringFiles/PGS005238.txt.gz
PGS005239
(PRS-CS)
 PGP000741 |
Tanha HM et al. HGG Adv (2025)
 Prostate carcinoma prostate carcinoma 943,048
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005239/ScoringFiles/PGS005239.txt.gz
PGS005240
(SBayesR)
 PGP000741 |
Tanha HM et al. HGG Adv (2025)
 Prostate carcinoma prostate carcinoma 904,103
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005240/ScoringFiles/PGS005240.txt.gz
PGS005241
(SBayesRC)
 PGP000741 |
Tanha HM et al. HGG Adv (2025)
 Prostate carcinoma prostate carcinoma 3,802,635
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005241/ScoringFiles/PGS005241.txt.gz
PGS005242
(T2D_PRS_PRS_CSx_META_T)
 PGP000742 |
Guo B G et al. Nat Commun (2025)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 1,257,036
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005242/ScoringFiles/PGS005242.txt.gz
PGS005243
(T2D_PRS_PRS_CSx_META_F_AFR)
 PGP000742 |
Guo B G et al. Nat Commun (2025)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 1,183,017
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005243/ScoringFiles/PGS005243.txt.gz
PGS005244
(T2D_PRS_PRS_CSx_META_F_AMR)
 PGP000742 |
Guo B G et al. Nat Commun (2025)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 960,470
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005244/ScoringFiles/PGS005244.txt.gz
PGS005245
(T2D_PRS_PRS_CSx_META_F_EAS)
 PGP000742 |
Guo B G et al. Nat Commun (2025)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 1,021,829
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005245/ScoringFiles/PGS005245.txt.gz
PGS005246
(T2D_PRS_PRS_CSx_META_F_EUR)
 PGP000742 |
Guo B G et al. Nat Commun (2025)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 1,111,848
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005246/ScoringFiles/PGS005246.txt.gz
PGS005247
(T2D_PRS_PRS_CSx_META_F_SAS)
 PGP000742 |
Guo B G et al. Nat Commun (2025)
 Type 2 diabetes (T2D) type 2 diabetes mellitus 1,126,657
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005247/ScoringFiles/PGS005247.txt.gz
PGS005248
(PGS4_QBB_9SNP)
 PGP000743 |
Ismail Umlai UK et al. J Lipid Res (2025)
 LDL-C levels low density lipoprotein cholesterol measurement 9
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005248/ScoringFiles/PGS005248.txt.gz
PGS005249
(PGS5_QBB_6SNP)
 PGP000743 |
Ismail Umlai UK et al. J Lipid Res (2025)
 LDL-C levels low density lipoprotein cholesterol measurement 6
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005249/ScoringFiles/PGS005249.txt.gz
PGS005250
(PGS14_QBB_14SNP)
 PGP000743 |
Ismail Umlai UK et al. J Lipid Res (2025)
 LDL-C levels low density lipoprotein cholesterol measurement 14
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005250/ScoringFiles/PGS005250.txt.gz
PGS005251
(iPRS)
 PGP000744 |
Olowofela AS et al. JCO Precis Oncol (2025)
 INFLA-Score platelet count,
C-reactive protein measurement,
neutrophil-to-lymphocyte ratio,
leukocyte quantity		 1,113
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005251/ScoringFiles/PGS005251.txt.gz
PGS005252
(IAVGC_AS_PRS)
 PGP000745 |
Small AM et al. Nat Genet (2025)
 Aortic stenosis aortic stenosis 1,119,377
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005252/ScoringFiles/PGS005252.txt.gz
PGS005253
(CVD_MetaPRS)
 PGP000746 |
Sun D et al. Genome Med (2025)
 Cardiovascular disease cardiovascular disease 3,846,195
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005253/ScoringFiles/PGS005253.txt.gz
PGS005254
(aortic_stenosis)
 PGP000747 |
Kany S et al. Nat Genet (2025)
 Aortic stenosis aortic stenosis 1,110,912
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005254/ScoringFiles/PGS005254.txt.gz
PGS005255
(mean_gradient)
 PGP000747 |
Kany S et al. Nat Genet (2025)
 Mean pressure gradient aortic stenosis,
aortic measurement		 1,111,632
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005255/ScoringFiles/PGS005255.txt.gz
PGS005256
(peak_velocity)
 PGP000747 |
Kany S et al. Nat Genet (2025)
 Peak aortic velocity aortic stenosis,
aortic measurement		 1,111,632
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005256/ScoringFiles/PGS005256.txt.gz
PGS005257
(aortic_valve_area)
 PGP000747 |
Kany S et al. Nat Genet (2025)
 Aortic valve area aortic measurement 1,111,632
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005257/ScoringFiles/PGS005257.txt.gz
PGS005258
(thyroid_cancer_mixed_pt)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Thyroid carcenoma thyroid carcinoma 84
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005258/ScoringFiles/PGS005258.txt.gz
PGS005259
(thyroid_cancer_mixed_prscs)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Thyroid carcenoma thyroid carcinoma 1,085,173
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005259/ScoringFiles/PGS005259.txt.gz
PGS005260
(thyroid_cancer_eur_prscs)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Thyroid carcenoma thyroid carcinoma 1,085,170
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005260/ScoringFiles/PGS005260.txt.gz
PGS005261
(benign_nodular_goiter_mixed_pt)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Benign nodular goiter benign,
nodular goiter		 110
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005261/ScoringFiles/PGS005261.txt.gz
PGS005262
(benign_nodular_goiter_mixed_prscs)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Benign nodular goiter benign,
nodular goiter		 1,085,173
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005262/ScoringFiles/PGS005262.txt.gz
PGS005263
(benign_nodular_goiter_eur_prscs)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Benign nodular goiter benign,
nodular goiter		 1,085,170
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005263/ScoringFiles/PGS005263.txt.gz
PGS005264
(graves_disease_mixed_pt)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Graves' disease Graves disease 112
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005264/ScoringFiles/PGS005264.txt.gz
PGS005265
(graves_disease_mixed_prscs)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Graves' disease Graves disease 1,085,173
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005265/ScoringFiles/PGS005265.txt.gz
PGS005266
(graves_disease_eur_prscs)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Graves' disease Graves disease 1,085,170
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005266/ScoringFiles/PGS005266.txt.gz
PGS005267
(hypothyroidism_mixed_pt)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Hypothyroidism hypothyroidism 439
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005267/ScoringFiles/PGS005267.txt.gz
PGS005268
(hypothyroidism_mixed_prscs)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Hypothyroidism hypothyroidism 1,085,173
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005268/ScoringFiles/PGS005268.txt.gz
PGS005269
(hypothyroidism_eur_prscs)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Hypothyroidism hypothyroidism 1,085,170
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005269/ScoringFiles/PGS005269.txt.gz
PGS005270
(lymphocytic_thyroiditis_mixed_pt)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Lymphocytic thyroiditis Hashimoto's thyroiditis 55
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005270/ScoringFiles/PGS005270.txt.gz
PGS005271
(lymphocytic_thyroiditis_mixed_prscs)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Lymphocytic thyroiditis Hashimoto's thyroiditis 1,085,156
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005271/ScoringFiles/PGS005271.txt.gz
PGS005272
(lymphocytic_thyroiditis_eur_prscs)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Lymphocytic thyroiditis Hashimoto's thyroiditis 1,085,142
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005272/ScoringFiles/PGS005272.txt.gz
PGS005273
(tc_vs_bng_mixed_prscs)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Thyroid carcenoma vs benign nodular goiter benign,
thyroid carcinoma,
nodular goiter		 1,085,164
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005273/ScoringFiles/PGS005273.txt.gz
PGS005274
(tc_vs_bng_eur_prscs)
 PGP000748 |
White SL et al. medRxiv (2025)
|Pre		 Thyroid carcenoma vs benign nodular goiter benign,
thyroid carcinoma,
nodular goiter		 1,084,965
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005274/ScoringFiles/PGS005274.txt.gz
PGS005275
(CRC_PRS_JPHC_JPGWAS)
 PGP000749 |
Nakano S et al. Cancer Epidemiol (2025)
 Colorectal cancer colorectal carcinoma 104,677
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005275/ScoringFiles/PGS005275.txt.gz
PGS005276
(FI_PS_EUR)
 PGP000750 |
Sarnowski C et al. Commun Biol (2025)
 Fasting insulin adjusted for BMI BMI-adjusted fasting blood insulin measurement 1,116,555
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005276/ScoringFiles/PGS005276.txt.gz
PGS005277
(FI_PS_AFR)
 PGP000750 |
Sarnowski C et al. Commun Biol (2025)
 Fasting insulin adjusted for BMI BMI-adjusted fasting blood insulin measurement 1,233,791
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005277/ScoringFiles/PGS005277.txt.gz
PGS005278
(FI_PS_AMR)
 PGP000750 |
Sarnowski C et al. Commun Biol (2025)
 Fasting insulin adjusted for BMI BMI-adjusted fasting blood insulin measurement 1,182,208
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005278/ScoringFiles/PGS005278.txt.gz
PGS005279
(Q001_BMI_cutRSQ0.3_LD_rho0.03)
 PGP000751 |
Sutoh Y et al. J Hum Genet (2024)
 Body mass index (BMI) body mass index 5,000,812
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005279/ScoringFiles/PGS005279.txt.gz
PGS005280
(IgE_GWAS_9260_Japanese_individuals_rev2.EAS)
 PGP000752 |
Sutoh Y et al. Am J Hum Genet (2025)
 Total IgE immunoglobulin E measurement 970,856
https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005280/ScoringFiles/PGS005280.txt.gz
PGS005281
(PRS12111_height)
 PGP000755 |
Ramírez-Luzuriaga MJ et al. Hum Mol Genet (2024)
 Height body height 12,111
-
 https://ftp.ebi.ac.uk/pub/databases/spot/pgs/scores/PGS005281/ScoringFiles/PGS005281.txt.gz
Showing 5151 to 5200 of 5296 rows